Available Packages The following bioinformatics packages are available on the Ivy Linux Virtual Machines
Bowtie2 Bowtie2 is a memory-efficient tool for aligning short sequences to long reference genomes.
For bowtie2 usage information, please click [here] (/userinfo/ivy-linux-sw/bioinformatics/bowtie2)
HISAT2 HISAT2 is a fast and sensitive tool for aligning short reads against the general human population (as well as single reference genome)
- Requires approval before installation
For HISAT2 usage information, please click here